Pseudomonas fluorescens F113, PSF113_0248 (ygdP)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_0248
Name
ygdP
Replicon chromosome
Genomic location 301830 - 302309 (- strand)

Cross-References

RefSeq YP_005205674.1
GI 378948186
EC Number 3.6.1.-
Entrez 11828325
INSDC AEV60279.1
NCBI Locus Tag PSF113_0248
UniParc UPI0002041F53
UniProtKB Acc G8PZE8
UniProtKB ID G8PZE8_PSEFL
UniRef100 UniRef100_A0A0D0TD12
UniRef50 UniRef50_A6UYD9
UniRef90 UniRef90_A6UYD9

Product

Feature Type CDS
Coding Frame 1
Product Name
protein YgdP
Synonyms
Evidence for Translation
Charge (pH 7) 3.17
Kyte-Doolittle Hydrophobicity Value -0.604
Molecular Weight (kDa) 18.9
Isoelectric Point (pI) 9.13

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 263 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000328 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_0248
Search term: ygdP
Search term: protein YgdP

Human Homologs

References

No references are associated with this feature.