Pseudomonas fluorescens F113, PSF113_0704

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_0704
Name
Replicon chromosome
Genomic location 841483 - 842832 (+ strand)

Cross-References

RefSeq YP_005206135.1
GI 378948647
EC Number 2.6.1.18
Entrez 11828790
INSDC AEV60740.1
NCBI Locus Tag PSF113_0704
UniParc UPI00023B3899
UniProtKB Acc G8Q656
UniProtKB ID G8Q656_PSEFL
UniRef100 UniRef100_G8Q656
UniRef50 UniRef50_Q9I700
UniRef90 UniRef90_P28269

Product

Feature Type CDS
Coding Frame 1
Product Name
Omega-amino acid-pyruvate aminotransferase
Synonyms
Evidence for Translation
Charge (pH 7) -2.78
Kyte-Doolittle Hydrophobicity Value -0.085
Molecular Weight (kDa) 48518.0
Isoelectric Point (pI) 6.63

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
3A8U TRANSFERASE 10/11/09 Crystal Structure of omega-Amino Acid:Pyruvate Aminotransferase Pseudomonas putida 1.4 X-RAY DIFFRACTION 95.5

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 639 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000130 (850 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_0704

Human Homologs

Ensembl 110, assembly GRCh38.p14
ornithine aminotransferase [Source:HGNC Symbol;Acc:HGNC:8091]
E-value: 9.1e-37
Percent Identity: 27.8

References

No references are associated with this feature.