Pseudomonas fluorescens F113, PSF113_3996

Gene Feature Overview

Strain	Pseudomonas fluorescens F113 GCF_000237065.1|latest
Locus Tag	PSF113_3996
Name
Replicon	chromosome
Genomic location	4705363 - 4706766 (+ strand)

Cross-References

RefSeq	YP_005209388.1
GI	378951900
Entrez	11832092
INSDC	AEV63993.1
NCBI Locus Tag	PSF113_3996
UniParc	UPI00023B4CA1
UniProtKB Acc	G8PZW7
UniProtKB ID	G8PZW7_PSEFL
UniRef100	UniRef100_G8PZW7
UniRef50	UniRef50_Q9I3Y3
UniRef90	UniRef90_J2Y8I6

Product

Feature Type	CDS
Coding Frame	1
Product Name	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps
Synonyms
Evidence for Translation
Charge (pH 7)	11.76
Kyte-Doolittle Hydrophobicity Value	0.812
Molecular Weight (kDa)	49501.4
Isoelectric Point (pI)	9.85

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 478 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001295 (965 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSF113_3996 Search term: Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps

Human Homologs

References