Pseudomonas fluorescens F113, PSF113_4437

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_4437
Name
Replicon chromosome
Genomic location 5177519 - 5178343 (- strand)

Cross-References

RefSeq YP_005209824.1
GI 378952336
Entrez 11832538
INSDC AEV64429.1
NCBI Locus Tag PSF113_4437
UniParc UPI00023B482C
UniProtKB Acc G8Q5N5
UniProtKB ID G8Q5N5_PSEFL
UniRef100 UniRef100_G8Q5N5
UniRef50 UniRef50_Q885Z7
UniRef90 UniRef90_Q885Z7

Product

Feature Type CDS
Coding Frame 1
Product Name
tRNA(Cytosine32)-2-thiocytidine synthetase
Synonyms
Evidence for Translation
Charge (pH 7) 0.02
Kyte-Doolittle Hydrophobicity Value -0.314
Molecular Weight (kDa) 31.2
Isoelectric Point (pI) 7.01

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 407 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001150 (540 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_4437

Human Homologs

References

No references are associated with this feature.