Pseudomonas fluorescens F113, PSF113_4480

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_4480
Name
Replicon chromosome
Genomic location 5233917 - 5236538 (- strand)

Cross-References

RefSeq YP_005209865.1
GI 378952377
EC Number 6.1.1.7
Entrez 11832583
INSDC AEV64470.1
NCBI Locus Tag PSF113_4480
UniParc UPI00023B495A
UniProtKB Acc G8Q6P3
UniProtKB ID G8Q6P3_PSEFL
UniRef100 UniRef100_G8Q6P3
UniRef50 UniRef50_Q6D1T0
UniRef90 UniRef90_Q4ZQI4

Product

Feature Type CDS
Coding Frame 1
Product Name
alanyl-tRNA synthetase
Synonyms
Evidence for Translation
Charge (pH 7) -20.89
Kyte-Doolittle Hydrophobicity Value -0.206
Molecular Weight (kDa) 94499.9
Isoelectric Point (pI) 5.33

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 667 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000870 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_4480

Human Homologs

Ensembl 110, assembly GRCh38.p14
alanyl-tRNA synthetase 1 [Source:HGNC Symbol;Acc:HGNC:20]
E-value: 5.9e-133
Percent Identity: 35.9

References

No references are associated with this feature.