Pseudomonas fluorescens F113, PSF113_4489

Gene Feature Overview

Strain	Pseudomonas fluorescens F113 GCF_000237065.1|latest
Locus Tag	PSF113_4489
Name
Replicon	chromosome
Genomic location	5245445 - 5246581 (- strand)

Cross-References

RefSeq	YP_005209874.1
GI	378952386
EC Number	2.6.1.11
Entrez	11832592
INSDC	AEV64479.1
NCBI Locus Tag	PSF113_4489
UniParc	UPI00023B4A50
UniProtKB Acc	G8Q6Q2
UniProtKB ID	G8Q6Q2_PSEFL
UniRef100	UniRef100_G8Q6Q2
UniRef50	UniRef50_P40732
UniRef90	UniRef90_Q4K834

Product

Feature Type	CDS
Coding Frame	1
Product Name	bifunctional n-succinyldiaminopimelate-aminotransferase acetylornithine transaminase protein
Synonyms
Evidence for Translation
Charge (pH 7)	-4.02
Kyte-Doolittle Hydrophobicity Value	0.080
Molecular Weight (kDa)	40235.5
Isoelectric Point (pI)	6.45

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 639 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000862 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSF113_4489 Search term: bifunctional n-succinyldiaminopimelate-aminotransferase acetylornithine transaminase protein

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000357838 ornithine aminotransferase [Source:HGNC Symbol;Acc:HGNC:8091] E-value: 1.3e-57 Percent Identity: 36.0

References