Pseudomonas fluorescens F113, PSF113_4590

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_4590
Name
Replicon chromosome
Genomic location 5344744 - 5345631 (+ strand)

Cross-References

RefSeq YP_005209975.1
GI 378952487
Entrez 11832693
INSDC AEV64580.1
NCBI Locus Tag PSF113_4590
UniParc UPI00023B4CC2
UniProtKB Acc G8Q7X4
UniProtKB ID G8Q7X4_PSEFL
UniRef100 UniRef100_G8Q7X4
UniRef50 UniRef50_Q4K786
UniRef90 UniRef90_G8Q7X4

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 1.04
Kyte-Doolittle Hydrophobicity Value -0.104
Molecular Weight (kDa) 32736.3
Isoelectric Point (pI) 7.28

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 484 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000055 (3840 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_4590

Human Homologs

References

No references are associated with this feature.