Pseudomonas fluorescens F113, PSF113_4623 (cspC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_4623
Name
cspC
Replicon chromosome
Genomic location 5378170 - 5378775 (+ strand)

Cross-References

RefSeq YP_005210007.1
GI 378952519
Entrez 11832726
INSDC AEV64612.1
NCBI Locus Tag PSF113_4623
UniParc UPI0002041EF3
UniProtKB Acc G8Q806
UniProtKB ID G8Q806_PSEFL
UniRef100 UniRef100_A0A0D0RXG9
UniRef50 UniRef50_I4N8V7
UniRef90 UniRef90_J2MUS3

Product

Feature Type CDS
Coding Frame 1
Product Name
protein CspC
Synonyms
Evidence for Translation
Charge (pH 7) 4.43
Kyte-Doolittle Hydrophobicity Value 0.341
Molecular Weight (kDa) 21.8
Isoelectric Point (pI) 9.73

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 489 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000926 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_4623
Search term: cspC
Search term: protein CspC

Human Homologs

References

No references are associated with this feature.