Pseudomonas fluorescens F113, PSF113_4688

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_4688
Name
Replicon chromosome
Genomic location 5457131 - 5458552 (- strand)

Cross-References

RefSeq YP_005210072.1
GI 378952584
Entrez 11832791
INSDC AEV64677.1
NCBI Locus Tag PSF113_4688
UniParc UPI00023B3E4C
UniProtKB Acc G8Q939
UniProtKB ID G8Q939_PSEFL
UniRef100 UniRef100_G8Q939
UniRef50 UniRef50_O34618
UniRef90 UniRef90_E2XM80

Product

Feature Type CDS
Coding Frame 1
Product Name
D-serine/D-alanine/glycine transporter
Synonyms
Evidence for Translation
Charge (pH 7) 10.09
Kyte-Doolittle Hydrophobicity Value 0.818
Molecular Weight (kDa) 50837.0
Isoelectric Point (pI) 9.68

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 415 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000219 (3043 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_4688

Human Homologs

Ensembl 110, assembly GRCh38.p14
solute carrier family 7 member 14 [Source:HGNC Symbol;Acc:HGNC:29326]
E-value: 5.6e-21
Percent Identity: 26.1

References

No references are associated with this feature.