Pseudomonas fluorescens F113, PSF113_5330

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_5330
Name
Replicon chromosome
Genomic location 6163963 - 6164751 (+ strand)

Cross-References

RefSeq YP_005210697.1
GI 378953209
Entrez 11833445
NCBI Locus Tag PSF113_5330

Product

Feature Type CDS
Coding Frame 1
Product Name
short chain dehydrogenase/reductase family oxidoreductase
Synonyms
Evidence for Translation
Charge (pH 7) 8.29
Kyte-Doolittle Hydrophobicity Value 0.134
Molecular Weight (kDa) 29022.6
Isoelectric Point (pI) 9.52

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 649 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000637 (510 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_5330

Human Homologs

Ensembl 110, assembly GRCh38.p14
hydroxysteroid dehydrogenase like 1 [Source:HGNC Symbol;Acc:HGNC:16475]
E-value: 2.1e-17
Percent Identity: 32.3

References

No references are associated with this feature.