Pseudomonas fluorescens F113, PSF113_5336 (trpC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_5336
Name
trpC
Replicon chromosome
Genomic location 6168017 - 6168853 (- strand)

Cross-References

RefSeq YP_005210703.1
GI 378953215
EC Number 3.5.4.19
EC Number 4.1.1.48
Entrez 11833451
INSDC AEV65308.1
NCBI Locus Tag PSF113_5336
UniParc UPI00023B3F6D
UniProtKB Acc G8Q099
UniProtKB ID G8Q099_PSEFL
UniRef100 UniRef100_G8Q099
UniRef50 UniRef50_P00911
UniRef90 UniRef90_Q4K503

Product

Feature Type CDS
Coding Frame 1
Product Name
protein TrpC
Synonyms
Evidence for Translation
Charge (pH 7) -8.36
Kyte-Doolittle Hydrophobicity Value 0.018
Molecular Weight (kDa) 30.4
Isoelectric Point (pI) 4.80

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 584 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000631 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_5336
Search term: trpC
Search term: protein TrpC

Human Homologs

References

No references are associated with this feature.