Pseudomonas fluorescens F113, PSF113_5337 (trpD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_5337
Name
trpD
Replicon chromosome
Genomic location 6168850 - 6169899 (- strand)

Cross-References

RefSeq YP_005210704.1
GI 378953216
EC Number 2.4.2.18
Entrez 11833452
INSDC AEV65309.1
NCBI Locus Tag PSF113_5337
UniParc UPI00023B3F6E
UniProtKB Acc G8Q0A0
UniProtKB ID G8Q0A0_PSEFL
UniRef100 UniRef100_G8Q0A0
UniRef50 UniRef50_P00500
UniRef90 UniRef90_Q88QR7

Product

Feature Type CDS
Coding Frame 1
Product Name
protein TrpD
Synonyms
Evidence for Translation
Charge (pH 7) -8.25
Kyte-Doolittle Hydrophobicity Value 0.058
Molecular Weight (kDa) 37061.1
Isoelectric Point (pI) 5.74

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 588 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000630 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_5337
Search term: trpD
Search term: protein TrpD

Human Homologs

References

No references are associated with this feature.