Pseudomonas fluorescens F113, PSF113_5348

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_5348
Name
Replicon chromosome
Genomic location 6182196 - 6182825 (- strand)

Cross-References

RefSeq YP_005210715.1
GI 378953227
Entrez 11833463
INSDC AEV65320.1
NCBI Locus Tag PSF113_5348
UniParc UPI00023B3F79
UniProtKB Acc G8Q0B1
UniProtKB ID G8Q0B1_PSEFL
UniRef100 UniRef100_G8Q0B1
UniRef50 UniRef50_Q4K4Y4
UniRef90 UniRef90_Q4K4Y4

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA-binding response regulator, LuxR family, near polyamine transporter
Synonyms
Evidence for Translation
Charge (pH 7) -0.59
Kyte-Doolittle Hydrophobicity Value 0.162
Molecular Weight (kDa) 22760.3
Isoelectric Point (pI) 6.80

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 603 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000584 (519 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_5348

Human Homologs

References

No references are associated with this feature.