Pseudomonas fluorescens F113, PSF113_5446 (dgcB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_5446
Name
dgcB
Replicon chromosome
Genomic location 6302984 - 6304936 (- strand)

Cross-References

RefSeq YP_005210813.1
GI 378953325
EC Number 2.1.2.-
EC Number 3.5.1.10
Entrez 11833565
INSDC AEV65418.1
NCBI Locus Tag PSF113_5446
UniParc UPI00023B42E4
UniProtKB Acc G8Q2E8
UniProtKB ID G8Q2E8_PSEFL
UniRef100 UniRef100_G8Q2E8
UniRef50 UniRef50_Q9HTG5
UniRef90 UniRef90_G8Q2E8

Product

Feature Type CDS
Coding Frame 1
Product Name
protein DgcB
Synonyms
Evidence for Translation
Charge (pH 7) 12.16
Kyte-Doolittle Hydrophobicity Value 0.039
Molecular Weight (kDa) 70501.3
Isoelectric Point (pI) 8.53

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 302 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004956 (511 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_5446
Search term: dgcB
Search term: protein DgcB

Human Homologs

References

No references are associated with this feature.