Pseudomonas fluorescens F113, PSF113_5493

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_5493
Name
Replicon chromosome
Genomic location 6359284 - 6359712 (- strand)

Cross-References

RefSeq YP_005210860.1
GI 378953372
EC Number 2.1.1.-
Entrez 11833612
INSDC AEV65465.1
NCBI Locus Tag PSF113_5493
UniParc UPI00023B440A
UniProtKB Acc G8Q2J5
UniProtKB ID G8Q2J5_PSEFL
UniRef100 UniRef100_G8Q2J5
UniRef50 UniRef50_Q4K4I4
UniRef90 UniRef90_G8Q2J5

Product

Feature Type CDS
Coding Frame 1
Product Name
cytochrome c556
Synonyms
Evidence for Translation
Charge (pH 7) -0.17
Kyte-Doolittle Hydrophobicity Value -0.483
Molecular Weight (kDa) 15787.8
Isoelectric Point (pI) 6.92

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 40 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000525 (500 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_5493
Search term: cytochrome c556

Human Homologs

References

No references are associated with this feature.