Pseudomonas fluorescens F113, PSF113_5517 (mdcE)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_5517
Name
mdcE
Replicon chromosome
Genomic location 6385097 - 6385900 (- strand)

Cross-References

RefSeq YP_005210884.1
GI 378953396
EC Number 4.1.1.-
Entrez 11833636
INSDC AEV65489.1
NCBI Locus Tag PSF113_5517
UniParc UPI00023B4530
UniProtKB Acc G8Q3J3
UniProtKB ID G8Q3J3_PSEFL
UniRef100 UniRef100_G8Q3J3
UniRef50 UniRef50_W0V3F6
UniRef90 UniRef90_G8Q3J3

Product

Feature Type CDS
Coding Frame 1
Product Name
protein MdcE
Synonyms
Evidence for Translation
Charge (pH 7) 1.17
Kyte-Doolittle Hydrophobicity Value 0.073
Molecular Weight (kDa) 28314.0
Isoelectric Point (pI) 7.72

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 57 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000211 (478 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_5517
Search term: mdcE
Search term: protein MdcE

Human Homologs

References

No references are associated with this feature.