Pseudomonas fluorescens F113, PSF113_5542 (yggT)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_5542
Name
yggT
Replicon chromosome
Genomic location 6412999 - 6413589 (+ strand)

Cross-References

RefSeq YP_005210909.1
GI 378953421
Entrez 11833661
INSDC AEV65514.1
NCBI Locus Tag PSF113_5542
UniParc UPI00023B462D
UniProtKB Acc G8Q3L8
UniProtKB ID G8Q3L8_PSEFL
UniRef100 UniRef100_G8Q3L8
UniRef50 UniRef50_P25254
UniRef90 UniRef90_G8Q3L8

Product

Feature Type CDS
Coding Frame 1
Product Name
protein YggT
Synonyms
Evidence for Translation
Charge (pH 7) 5.16
Kyte-Doolittle Hydrophobicity Value 1.162
Molecular Weight (kDa) 21.6
Isoelectric Point (pI) 9.93

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 276 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000383 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_5542
Search term: yggT
Search term: protein YggT

Human Homologs

References

No references are associated with this feature.