Pseudomonas fluorescens F113, PSF113_5562

Gene Feature Overview

Strain	Pseudomonas fluorescens F113 GCF_000237065.1|latest
Locus Tag	PSF113_5562
Name
Replicon	chromosome
Genomic location	6429720 - 6430721 (+ strand)

Cross-References

RefSeq	YP_005210929.1
GI	378953441
EC Number	3.1.1.1
Entrez	11833681
INSDC	AEV65534.1
NCBI Locus Tag	PSF113_5562
UniParc	UPI00023B463D
UniProtKB Acc	G8Q3N8
UniProtKB ID	G8Q3N8_PSEFL
UniRef100	UniRef100_G8Q3N8
UniRef50	UniRef50_G8Q3N8
UniRef90	UniRef90_G8Q3N8

Product

Feature Type	CDS
Coding Frame	1
Product Name	hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase
Synonyms
Evidence for Translation
Charge (pH 7)	4.51
Kyte-Doolittle Hydrophobicity Value	-0.298
Molecular Weight (kDa)	36854.2
Isoelectric Point (pI)	8.16

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 188 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000359 (530 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSF113_5562 Search term: hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000326491 abhydrolase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:17553] E-value: 1.6e-33 Percent Identity: 28.8

References