Pseudomonas fluorescens SBW25, PFLU0025

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU0025
Name
Replicon chromosome
Genomic location 27274 - 28842 (- strand)

Cross-References

RefSeq YP_002869722.1
GI 229587603
Entrez 7816676
INSDC CAY46310.1
UniParc UPI00019D9B2A
UniProtKB Acc C3K4I2
UniProtKB ID C3K4I2_PSEFS
UniRef100 UniRef100_C3K4I2
UniRef50 UniRef50_G8PX82
UniRef90 UniRef90_C3K4I2

Product

Feature Type CDS
Coding Frame 1
Product Name
putative ABC transporter permease
Synonyms
Evidence for Translation
Charge (pH 7) 9.69
Kyte-Doolittle Hydrophobicity Value 0.643
Molecular Weight (kDa) 56295.7
Isoelectric Point (pI) 9.15

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 437 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000029 (912 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU0025

Human Homologs

Ensembl 110, assembly GRCh38.p14
solute carrier family 26 member 11 [Source:HGNC Symbol;Acc:HGNC:14471]
E-value: 7.1e-41
Percent Identity: 29.5
Ensembl 110, assembly GRCh38.p14
solute carrier family 26 member 11 [Source:HGNC Symbol;Acc:HGNC:14471]
E-value: 7.1e-41
Percent Identity: 29.5
Ensembl 110, assembly GRCh38.p14
solute carrier family 26 member 11 [Source:HGNC Symbol;Acc:HGNC:14471]
E-value: 7.1e-41
Percent Identity: 29.5
Ensembl 110, assembly GRCh38.p14
solute carrier family 26 member 11 [Source:HGNC Symbol;Acc:HGNC:14471]
E-value: 7.1e-41
Percent Identity: 29.5

References

No references are associated with this feature.