Pseudomonas fluorescens SBW25, PFLU0027

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU0027
Name
Replicon chromosome
Genomic location 29873 - 31387 (- strand)

Cross-References

RefSeq YP_002869724.1
GI 229587605
Entrez 7820004
INSDC CAY46312.1
UniParc UPI00019D9B2C
UniProtKB Acc C3K4I4
UniProtKB ID C3K4I4_PSEFS
UniRef100 UniRef100_C3K4I4
UniRef50 UniRef50_Q4KKQ0
UniRef90 UniRef90_Q4KKQ0

Product

Feature Type CDS
Coding Frame 1
Product Name
putative choline sulfatase
Synonyms
Evidence for Translation
Charge (pH 7) -16.14
Kyte-Doolittle Hydrophobicity Value -0.400
Molecular Weight (kDa) 57037.1
Isoelectric Point (pI) 5.20

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 281 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000031 (496 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU0027

Human Homologs

Ensembl 110, assembly GRCh38.p14
iduronate 2-sulfatase [Source:HGNC Symbol;Acc:HGNC:5389]
E-value: 6.6e-36
Percent Identity: 28.7

References

No references are associated with this feature.