Pseudomonas fluorescens SBW25, PFLU1046

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU1046
Name
Replicon chromosome
Genomic location 1157024 - 1157599 (+ strand)

Cross-References

RefSeq YP_002870706.1
GI 229588587
Entrez 7820199
INSDC CAY47310.1
UniParc UPI00019D9FA1
UniProtKB Acc C3K6F6
UniProtKB ID C3K6F6_PSEFS
UniRef100 UniRef100_C3K6F6
UniRef50 UniRef50_Q4KI14
UniRef90 UniRef90_C3K6F6

Product

Feature Type CDS
Coding Frame 1
Product Name
putative RNA polymerase sigma factor
Synonyms
Evidence for Translation
Charge (pH 7) 5.35
Kyte-Doolittle Hydrophobicity Value -0.486
Molecular Weight (kDa) 21263.9
Isoelectric Point (pI) 9.37

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 331 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000147 (835 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU1046

Human Homologs

References

No references are associated with this feature.