Pseudomonas fluorescens SBW25, PFLU1365 (pcaF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU1365
Name
pcaF
Replicon chromosome
Genomic location 1505259 - 1506458 (+ strand)

Cross-References

RefSeq YP_002871014.1
GI 229588895
Entrez 7817375
INSDC CAY47619.1
UniParc UPI00019DA488
UniProtKB Acc C3KAN4
UniProtKB ID C3KAN4_PSEFS
UniRef100 UniRef100_C3KAN4
UniRef50 UniRef50_P0C7L2
UniRef90 UniRef90_G8PXF7

Product

Feature Type CDS
Coding Frame 1
Product Name
beta-ketoadipyl CoA thiolase
Synonyms
Evidence for Translation
Charge (pH 7) -3.66
Kyte-Doolittle Hydrophobicity Value 0.087
Molecular Weight (kDa) 41.7
Isoelectric Point (pI) 6.00

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 476 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000227 (529 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU1365
Search term: pcaF

Human Homologs

Ensembl 110, assembly GRCh38.p14
acetyl-CoA acyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:83]
E-value: 1.5e-78
Percent Identity: 43.5

References

No references are associated with this feature.