Pseudomonas fluorescens SBW25, PFLU2416

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU2416
Name
Replicon chromosome
Genomic location 2626400 - 2626852 (- strand)

Cross-References

RefSeq YP_002872018.1
GI 229589899
Entrez 7817142
INSDC CAY48647.1
UniParc UPI00019DA2A0
UniProtKB Acc C3K9B1
UniProtKB ID C3K9B1_PSEFS
UniRef100 UniRef100_C3K9B1
UniRef50 UniRef50_Q48JN9
UniRef90 UniRef90_C3K9B1

Product

Feature Type CDS
Coding Frame 1
Product Name
putative type II secretion pathway protein H
Synonyms
Evidence for Translation
Charge (pH 7) 1.71
Kyte-Doolittle Hydrophobicity Value -0.173
Molecular Weight (kDa) 16.7
Isoelectric Point (pI) 9.36

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 37 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000657 (384 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU2416

Human Homologs

References

No references are associated with this feature.