Pseudomonas fluorescens SBW25, PFLU3945

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU3945
Name
Replicon chromosome
Genomic location 4357517 - 4358176 (- strand)

Cross-References

RefSeq YP_002873497.1
GI 229591378
Entrez 7818984
INSDC CAY50337.1
UniParc UPI00019DA852
UniProtKB Acc C3JYL6
UniProtKB ID C3JYL6_PSEFS
UniRef100 UniRef100_C3JYL6
UniRef50 UniRef50_Q4KDN1
UniRef90 UniRef90_G8QBC0

Product

Feature Type CDS
Coding Frame 1
Product Name
TetR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 1.41
Kyte-Doolittle Hydrophobicity Value -0.237
Molecular Weight (kDa) 25091.7
Isoelectric Point (pI) 7.75

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 144 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000427 (435 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU3945

Human Homologs

References

No references are associated with this feature.