Pseudomonas fluorescens SBW25, PFLU3948

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU3948
Name
Replicon chromosome
Genomic location 4359644 - 4360906 (+ strand)

Cross-References

RefSeq YP_002873500.1
GI 229591381
Entrez 7818987
INSDC CAY50340.1
UniParc UPI00019DA855
UniProtKB Acc C3JYL9
UniProtKB ID C3JYL9_PSEFS
UniRef100 UniRef100_C3JYL9
UniRef50 UniRef50_Q88JX6
UniRef90 UniRef90_C3JYL9

Product

Feature Type CDS
Coding Frame 1
Product Name
putative family S43 non-peptidase protein
Synonyms
Evidence for Translation
Charge (pH 7) -0.59
Kyte-Doolittle Hydrophobicity Value -0.433
Molecular Weight (kDa) 46.2
Isoelectric Point (pI) 6.81

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 16 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000239 (1158 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU3948

Human Homologs

References

No references are associated with this feature.