Pseudomonas fluorescens SBW25, PFLU5553

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU5553
Name
Replicon chromosome
Genomic location 6083299 - 6083637 (+ strand)

Cross-References

RefSeq YP_002875048.1
GI 229592929
Entrez 7817777
INSDC CAY52807.1
UniParc UPI00019DADF1
UniProtKB Acc C3K302
UniProtKB ID C3K302_PSEFS
UniRef100 UniRef100_I2BUT0
UniRef50 UniRef50_G8Q094
UniRef90 UniRef90_G8Q094

Product

Feature Type CDS
Coding Frame 1
Product Name
putative HIT domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) -1.63
Kyte-Doolittle Hydrophobicity Value -0.214
Molecular Weight (kDa) 12.7
Isoelectric Point (pI) 6.50

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 638 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000635 (884 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU5553

Human Homologs

Ensembl 110, assembly GRCh38.p14
histidine triad nucleotide binding protein 1 [Source:HGNC Symbol;Acc:HGNC:4912]
E-value: 1.7e-37
Percent Identity: 59.5

References

No references are associated with this feature.