Pseudomonas fluorescens SBW25, PFLU5604
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens SBW25
GCF_000009225.2|latest |
| Locus Tag |
PFLU5604
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 6139377 - 6140645 (- strand) |
Cross-References
| RefSeq | YP_002875099.1 |
| GI | 229592980 |
| Entrez | 7816985 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
putative aminotransferase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -4.14 |
| Kyte-Doolittle Hydrophobicity Value | 0.036 |
| Molecular Weight (kDa) | 44937.7 |
| Isoelectric Point (pI) | 6.44 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 638 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000514 (443 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PFLU5604
Search term: putative aminotransferase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
ornithine aminotransferase [Source:HGNC Symbol;Acc:HGNC:8091]
E-value:
5.5e-44
Percent Identity:
33.1
|
References
No references are associated with this feature.