Pseudomonas fluorescens SBW25, PFLU5652 (glyA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens SBW25
GCF_000009225.2|latest |
| Locus Tag |
PFLU5652
|
| Name |
glyA
|
| Replicon | chromosome |
| Genomic location | 6192602 - 6193855 (- strand) |
Cross-References
| RefSeq | YP_002875146.1 |
| GI | 229593027 |
| EC Number | 2.1.2.1 |
| Entrez | 7822170 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
serine hydroxymethyltransferase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -2.03 |
| Kyte-Doolittle Hydrophobicity Value | -0.127 |
| Molecular Weight (kDa) | 44.7 |
| Isoelectric Point (pI) | 6.70 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 654 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003094 (1150 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PFLU5652
Search term: glyA
Search term: serine hydroxymethyltransferase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
serine hydroxymethyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:10852]
E-value:
3.2e-92
Percent Identity:
47.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
serine hydroxymethyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:10852]
E-value:
3.2e-92
Percent Identity:
47.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
serine hydroxymethyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:10852]
E-value:
3.2e-92
Percent Identity:
47.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
serine hydroxymethyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:10852]
E-value:
3.2e-92
Percent Identity:
47.1
|
References
No references are associated with this feature.