Pseudomonas fluorescens SBW25, PFLU5728

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU5728
Name
Replicon chromosome
Genomic location 6280477 - 6281196 (+ strand)

Cross-References

RefSeq YP_002875220.1
GI 229593101
Entrez 7816702
INSDC CAY53089.1
UniParc UPI00019DAECB
UniProtKB Acc C3K3H4
UniProtKB ID C3K3H4_PSEFS
UniRef100 UniRef100_C3K3H4
UniRef50 UniRef50_S6AC35
UniRef90 UniRef90_C3K3H4

Product

Feature Type CDS
Coding Frame 1
Product Name
16S ribosomal RNA methyltransferase RsmE
Synonyms
Evidence for Translation
Charge (pH 7) -2.93
Kyte-Doolittle Hydrophobicity Value -0.105
Molecular Weight (kDa) 26089.7
Isoelectric Point (pI) 6.42

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 534 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000410 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU5728

Human Homologs

References

No references are associated with this feature.