Pseudomonas fluorescens SBW25, PFLU5868

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU5868
Name
Replicon chromosome
Genomic location 6424429 - 6425349 (+ strand)

Cross-References

RefSeq YP_002875355.1
GI 229593236
Entrez 7817420
INSDC CAY53317.1
UniParc UPI00019DAF70
UniProtKB Acc C3K3V9
UniProtKB ID C3K3V9_PSEFS
UniRef100 UniRef100_A0A0C5JSZ6
UniRef50 UniRef50_P0DKS0
UniRef90 UniRef90_V9R476

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -1.78
Kyte-Doolittle Hydrophobicity Value 0.085
Molecular Weight (kDa) 33.3
Isoelectric Point (pI) 5.53

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 571 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000443 (485 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU5868

Human Homologs

Ensembl 110, assembly GRCh38.p14
stomatin like 2 [Source:HGNC Symbol;Acc:HGNC:14559]
E-value: 2.1e-32
Percent Identity: 40.9

References

No references are associated with this feature.