Pseudomonas fluorescens SBW25, PFLU6057 (aspA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU6057
Name
aspA
Replicon chromosome
Genomic location 6625408 - 6626844 (+ strand)

Cross-References

RefSeq YP_002875540.1
GI 229593421
EC Number 4.3.1.1
Entrez 7816812
INSDC CAY53626.1
UniParc UPI00019DADB9
UniProtKB Acc C3K4E4
UniProtKB ID C3K4E4_PSEFS
UniRef100 UniRef100_C3K4E4
UniRef50 UniRef50_P07346
UniRef90 UniRef90_P07346

Product

Feature Type CDS
Coding Frame 1
Product Name
aspartate ammonia-lyase
Synonyms
Evidence for Translation
Charge (pH 7) -7.94
Kyte-Doolittle Hydrophobicity Value 0.134
Molecular Weight (kDa) 51420.9
Isoelectric Point (pI) 5.47

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 620 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004982 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU6057
Search term: aspA

Human Homologs

Ensembl 110, assembly GRCh38.p14
fumarate hydratase [Source:HGNC Symbol;Acc:HGNC:3700]
E-value: 1.0e-94
Percent Identity: 40.9

References

No references are associated with this feature.