Pseudomonas putida GB-1, PputGB1_0084 (def)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_0084
Name
def
Replicon chromosome
Genomic location 91250 - 91756 (- strand)

Cross-References

RefSeq YP_001666336.1
GI 167031105
EC Number 3.5.1.88
Entrez 5867772
INSDC ABY96000.1
NCBI Locus Tag PputGB1_0084
UniParc UPI0000F25731
UniProtKB Acc B0KF30
UniProtKB ID B0KF30_PSEPG
UniRef100 UniRef100_B0KF30
UniRef50 UniRef50_Q9I7A8
UniRef90 UniRef90_Q88RR1

Product

Feature Type CDS
Coding Frame 1
Product Name
peptide deformylase
Synonyms
Evidence for Translation
Charge (pH 7) -6.89
Kyte-Doolittle Hydrophobicity Value -0.420
Molecular Weight (kDa) 19.4
Isoelectric Point (pI) 4.94

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 587 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000019 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_0084
Search term: def

Human Homologs

References

No references are associated with this feature.