Pseudomonas putida GB-1, PputGB1_0090 (aroE)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida GB-1
GCF_000019125.1|latest |
| Locus Tag |
PputGB1_0090
|
| Name |
aroE
|
| Replicon | chromosome |
| Genomic location | 97051 - 97875 (+ strand) |
Cross-References
| RefSeq | YP_001666342.1 |
| GI | 167031111 |
| Entrez | 5867778 |
| NCBI Locus Tag | PputGB1_0090 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
shikimate 5-dehydrogenase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -7.40 |
| Kyte-Doolittle Hydrophobicity Value | 0.027 |
| Molecular Weight (kDa) | 29240.1 |
| Isoelectric Point (pI) | 4.76 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 4OMU | OXIDOREDUCTASE | 01/27/14 | Crystal structure of shikimate dehydrogenase (AroE) from Pseudomonas putida | Pseudomonas putida | 1.65 | X-RAY DIFFRACTION | 97.4 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 602 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000025 (538 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PputGB1_0090
Search term: aroE
Search term: shikimate 5-dehydrogenase
|
Human Homologs
References
No references are associated with this feature.