Pseudomonas putida GB-1, PputGB1_0094

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_0094
Name
Replicon chromosome
Genomic location 102276 - 103175 (+ strand)

Cross-References

RefSeq YP_001666346.1
GI 167031115
Entrez 5867782
INSDC ABY96010.1
NCBI Locus Tag PputGB1_0094
UniParc UPI0000F258C4
UniProtKB Acc B0KFV9
UniProtKB ID B0KFV9_PSEPG
UniRef100 UniRef100_B0KFV9
UniRef50 UniRef50_Q48QH1
UniRef90 UniRef90_B0KFV9

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 1.63
Kyte-Doolittle Hydrophobicity Value -0.076
Molecular Weight (kDa) 33320.9
Isoelectric Point (pI) 7.71

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 509 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000032 (500 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_0094

Human Homologs

References

No references are associated with this feature.