Pseudomonas putida GB-1, PputGB1_0437

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_0437
Name
Replicon chromosome
Genomic location 511471 - 512142 (+ strand)

Cross-References

RefSeq YP_001666684.1
GI 167031453
Entrez 5868176
INSDC ABY96348.1
NCBI Locus Tag PputGB1_0437
UniParc UPI0000F24773
UniProtKB Acc B0KJ98
UniProtKB ID B0KJ98_PSEPG
UniRef100 UniRef100_B0KJ98
UniRef50 UniRef50_Q7NQB4
UniRef90 UniRef90_Q88QT2

Product

Feature Type CDS
Coding Frame 1
Product Name
nucleotidyl transferase
Synonyms
Evidence for Translation
Charge (pH 7) -3.63
Kyte-Doolittle Hydrophobicity Value 0.006
Molecular Weight (kDa) 23955.3
Isoelectric Point (pI) 6.34

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4Y7U TRANSFERASE 02/16/15 Structural analysis of MurU Pseudomonas putida (strain BIRD-1) 1.7 X-RAY DIFFRACTION 96.9
4Y7V TRANSFERASE 02/16/15 Structural analysis of MurU Pseudomonas putida (strain BIRD-1) 1.8 X-RAY DIFFRACTION 96.9
4Y7T TRANSFERASE 02/16/15 Structural analysis of MurU Pseudomonas putida 1.8 X-RAY DIFFRACTION 96.9

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 626 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000580 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_0437

Human Homologs

References

No references are associated with this feature.