Pseudomonas putida GB-1, PputGB1_2040

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_2040
Name
Replicon chromosome
Genomic location 2289353 - 2290201 (- strand)

Cross-References

RefSeq YP_001668277.1
GI 167033046
Entrez 5869829
INSDC ABY97941.1
NCBI Locus Tag PputGB1_2040
UniParc UPI0000F25470
UniProtKB Acc B0KLG4
UniProtKB ID B0KLG4_PSEPG
UniRef100 UniRef100_B0KLG4
UniRef50 UniRef50_Q48JV1
UniRef90 UniRef90_B1J6M0

Product

Feature Type CDS
Coding Frame 1
Product Name
shikimate 5-dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -5.14
Kyte-Doolittle Hydrophobicity Value 0.172
Molecular Weight (kDa) 29819.8
Isoelectric Point (pI) 5.84

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 602 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000242 (485 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_2040

Human Homologs

References

No references are associated with this feature.