Pseudomonas putida GB-1, PputGB1_2129

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_2129
Name
Replicon chromosome
Genomic location 2378669 - 2379343 (- strand)

Cross-References

RefSeq YP_001668366.1
GI 167033135
Entrez 5869918
INSDC ABY98030.1
NCBI Locus Tag PputGB1_2129
UniParc UPI0000F25631
UniProtKB Acc B0KMH4
UniProtKB ID B0KMH4_PSEPG
UniRef100 UniRef100_B0KMH4
UniRef50 UniRef50_B0KMH4
UniRef90 UniRef90_B0KMH4

Product

Feature Type CDS
Coding Frame 1
Product Name
alginate lyase 2
Synonyms
Evidence for Translation
Charge (pH 7) 0.34
Kyte-Doolittle Hydrophobicity Value -0.171
Molecular Weight (kDa) 24190.1
Isoelectric Point (pI) 7.13

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 4 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG016499 (56 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_2129
Search term: alginate lyase 2

Human Homologs

References

No references are associated with this feature.