Pseudomonas putida GB-1, PputGB1_3986 (argD)

Gene Feature Overview

Strain	Pseudomonas putida GB-1 GCF_000019125.1|latest
Locus Tag	PputGB1_3986
Name	argD
Replicon	chromosome
Genomic location	4434259 - 4435479 (- strand)

Cross-References

RefSeq	YP_001670212.1
GI	167034981
Entrez	5871786
INSDC	ABY99876.1
NCBI Locus Tag	PputGB1_3986
UniParc	UPI0000F25371
UniProtKB Acc	B0KR50
UniProtKB ID	B0KR50_PSEPG
UniRef100	UniRef100_B0KR50
UniRef50	UniRef50_P40732
UniRef90	UniRef90_P59319

Product

Feature Type	CDS
Coding Frame	1
Product Name	bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein
Synonyms
Evidence for Translation
Charge (pH 7)	-4.08
Kyte-Doolittle Hydrophobicity Value	-0.038
Molecular Weight (kDa)	43448.1
Isoelectric Point (pI)	6.45

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 639 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000862 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PputGB1_3986 Search term: argD Search term: bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000357838 ornithine aminotransferase [Source:HGNC Symbol;Acc:HGNC:8091] E-value: 7.4e-62 Percent Identity: 35.8

References