Pseudomonas putida GB-1, PputGB1_4071

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_4071
Name
Replicon chromosome
Genomic location 4524100 - 4524936 (- strand)

Cross-References

RefSeq YP_001670297.1
GI 167035066
Entrez 5871871
INSDC ABY99961.1
NCBI Locus Tag PputGB1_4071
UniParc UPI0000F250E4
UniProtKB Acc B0KS38
UniProtKB ID B0KS38_PSEPG
UniRef100 UniRef100_B0KS38
UniRef50 UniRef50_C7XAN2
UniRef90 UniRef90_Q1I6M9

Product

Feature Type CDS
Coding Frame 1
Product Name
RNA-binding S1 domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) -0.62
Kyte-Doolittle Hydrophobicity Value -0.126
Molecular Weight (kDa) 30927.5
Isoelectric Point (pI) 6.80

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 150 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001076 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_4071

Human Homologs

References

No references are associated with this feature.