Pseudomonas putida GB-1, PputGB1_4438

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_4438
Name
Replicon chromosome
Genomic location 4969102 - 4970448 (- strand)

Cross-References

RefSeq YP_001670662.1
GI 167035431
Entrez 5872246
NCBI Locus Tag PputGB1_4438

Product

Feature Type CDS
Coding Frame 1
Product Name
benzoate transport
Synonyms
Evidence for Translation
Charge (pH 7) 8.85
Kyte-Doolittle Hydrophobicity Value 0.774
Molecular Weight (kDa) 47144.2
Isoelectric Point (pI) 9.80

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 430 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000234 (2404 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_4438

Human Homologs

Ensembl 110, assembly GRCh38.p14
solute carrier family 22 member 1 [Source:HGNC Symbol;Acc:HGNC:10963]
E-value: 6.1e-09
Percent Identity: 28.9
Ensembl 110, assembly GRCh38.p14
solute carrier family 22 member 1 [Source:HGNC Symbol;Acc:HGNC:10963]
E-value: 6.1e-09
Percent Identity: 28.9
Ensembl 110, assembly GRCh38.p14
solute carrier family 22 member 1 [Source:HGNC Symbol;Acc:HGNC:10963]
E-value: 6.1e-09
Percent Identity: 28.9

References

No references are associated with this feature.