Pseudomonas putida GB-1, PputGB1_5175

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_5175
Name
Replicon chromosome
Genomic location 5787009 - 5787821 (- strand)

Cross-References

RefSeq YP_001671395.1
GI 167036164
EC Number 3.2.2.23
Entrez 5872990
INSDC ABZ01060.1
NCBI Locus Tag PputGB1_5175
UniParc UPI0000F25712
UniProtKB Acc B0KN79
UniProtKB ID FPG_PSEPG
UniRef100 UniRef100_B0KN79
UniRef50 UniRef50_Q4K4A5
UniRef90 UniRef90_Q4K4A5

Product

Feature Type CDS
Coding Frame 1
Product Name
formamidopyrimidine-DNA glycosylase
Synonyms
Evidence for Translation
Charge (pH 7) 7.08
Kyte-Doolittle Hydrophobicity Value -0.165
Molecular Weight (kDa) 30119.6
Isoelectric Point (pI) 9.43

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 445 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000348 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_5175

Human Homologs

References

No references are associated with this feature.