Pseudomonas putida GB-1, PputGB1_5227

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_5227
Name
Replicon chromosome
Genomic location 5839249 - 5840049 (- strand)

Cross-References

RefSeq YP_001671445.1
GI 167036214
Entrez 5873041
INSDC ABZ01110.1
NCBI Locus Tag PputGB1_5227
UniParc UPI0000F25714
UniProtKB Acc B0KP52
UniProtKB ID B0KP52_PSEPG
UniRef100 UniRef100_B0KP52
UniRef50 UniRef50_Q9RMT3
UniRef90 UniRef90_L0FT87

Product

Feature Type CDS
Coding Frame 1
Product Name
TonB family protein
Synonyms
Evidence for Translation
Charge (pH 7) 12.23
Kyte-Doolittle Hydrophobicity Value -0.222
Molecular Weight (kDa) 28.0
Isoelectric Point (pI) 10.75

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 134 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000196 (454 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_5227

Human Homologs

References

No references are associated with this feature.