Pseudomonas putida GB-1, PputGB1_5387 (aspA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_5387
Name
aspA
Replicon chromosome
Genomic location 6014025 - 6015482 (+ strand)

Cross-References

RefSeq YP_001671604.1
GI 167036373
Entrez 5873202
NCBI Locus Tag PputGB1_5387

Product

Feature Type CDS
Coding Frame 1
Product Name
aspartate ammonia-lyase
Synonyms
Evidence for Translation
Charge (pH 7) -6.49
Kyte-Doolittle Hydrophobicity Value 0.081
Molecular Weight (kDa) 52429.0
Isoelectric Point (pI) 5.98

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 620 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004982 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_5387
Search term: aspA

Human Homologs

Ensembl 110, assembly GRCh38.p14
fumarate hydratase [Source:HGNC Symbol;Acc:HGNC:3700]
E-value: 3.4e-98
Percent Identity: 42.1

References

No references are associated with this feature.