Pseudomonas putida S16, PPS_0402

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_0402
Name
Replicon chromosome
Genomic location 480076 - 480747 (+ strand)

Cross-References

RefSeq YP_004699867.1
GI 339485339
Entrez 10936070
NCBI Locus Tag PPS_0402

Product

Feature Type CDS
Coding Frame 1
Product Name
nucleotidyl transferase subunit
Synonyms
Evidence for Translation
Charge (pH 7) -6.15
Kyte-Doolittle Hydrophobicity Value 0.003
Molecular Weight (kDa) 23899.1
Isoelectric Point (pI) 6.07

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4Y7U TRANSFERASE 02/16/15 Structural analysis of MurU Pseudomonas putida (strain BIRD-1) 1.7 X-RAY DIFFRACTION 96.9
4Y7V TRANSFERASE 02/16/15 Structural analysis of MurU Pseudomonas putida (strain BIRD-1) 1.8 X-RAY DIFFRACTION 96.9
4Y7T TRANSFERASE 02/16/15 Structural analysis of MurU Pseudomonas putida 1.8 X-RAY DIFFRACTION 96.9

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 627 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000580 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_0402

Human Homologs

References

No references are associated with this feature.