Pseudomonas putida S16, PPS_0406

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_0406
Name
Replicon chromosome
Genomic location 485156 - 485776 (+ strand)

Cross-References

RefSeq YP_004699871.1
GI 339485343
Entrez 10936074
INSDC AEJ10991.1
NCBI Locus Tag PPS_0406
UniParc UPI0002172771
UniProtKB Acc F8FZT1
UniProtKB ID F8FZT1_PSEP6
UniRef100 UniRef100_F8FZT1
UniRef50 UniRef50_Q4K4Y4
UniRef90 UniRef90_Q4K4Y4

Product

Feature Type CDS
Coding Frame 1
Product Name
two component LuxR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -0.59
Kyte-Doolittle Hydrophobicity Value 0.053
Molecular Weight (kDa) 22356.8
Isoelectric Point (pI) 6.80

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 596 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000584 (519 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_0406

Human Homologs

References

No references are associated with this feature.