Pseudomonas putida S16, PPS_0425

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_0425
Name
Replicon chromosome
Genomic location 504173 - 504955 (- strand)

Cross-References

RefSeq YP_004699890.1
GI 339485362
Entrez 10936093
INSDC AEJ11010.1
NCBI Locus Tag PPS_0425
UniParc UPI0002172782
UniProtKB Acc F8G0Z5
UniProtKB ID F8G0Z5_PSEP6
UniRef100 UniRef100_A0A099MSC8
UniRef50 UniRef50_W6QZP5
UniRef90 UniRef90_B1JE27

Product

Feature Type CDS
Coding Frame 1
Product Name
short-chain dehydrogenase/reductase SDR
Synonyms
Evidence for Translation
Charge (pH 7) 13.77
Kyte-Doolittle Hydrophobicity Value 0.069
Molecular Weight (kDa) 28.7
Isoelectric Point (pI) 10.42

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 650 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000637 (510 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_0425

Human Homologs

Ensembl 110, assembly GRCh38.p14
hydroxysteroid dehydrogenase like 1 [Source:HGNC Symbol;Acc:HGNC:16475]
E-value: 1.6e-17
Percent Identity: 32.6

References

No references are associated with this feature.