Pseudomonas putida S16, PPS_1014

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_1014
Name
Replicon chromosome
Genomic location 1126933 - 1127145 (- strand)

Cross-References

RefSeq YP_004700471.1
GI 339485943
Entrez 10936674
INSDC AEJ11591.1
NCBI Locus Tag PPS_1014
UniParc UPI0001FB9ACF
UniProtKB Acc F8FX85
UniProtKB ID F8FX85_PSEP6
UniRef100 UniRef100_A0A099MUB2
UniRef50 UniRef50_P72188
UniRef90 UniRef90_I7C7W1

Product

Feature Type CDS
Coding Frame 1
Product Name
cold-shock DNA-binding domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) 0.22
Kyte-Doolittle Hydrophobicity Value -0.631
Molecular Weight (kDa) 7.7
Isoelectric Point (pI) 7.54

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 501 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000447 (851 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_1014

Human Homologs

References

No references are associated with this feature.