Pseudomonas putida S16, PPS_1047

Gene Feature Overview

Strain	Pseudomonas putida S16 GCF_000219705.1|latest
Locus Tag	PPS_1047
Name
Replicon	chromosome
Genomic location	1165278 - 1166432 (+ strand)

Cross-References

RefSeq	YP_004700502.1
GI	339485974
Entrez	10936705
INSDC	AEJ11622.1
NCBI Locus Tag	PPS_1047
UniParc	UPI0002173F3E
UniProtKB Acc	F8FXB6
UniProtKB ID	F8FXB6_PSEP6
UniRef100	UniRef100_A0A099MW90
UniRef50	UniRef50_G8PWC9
UniRef90	UniRef90_I7B8X4

Product

Feature Type	CDS
Coding Frame	1
Product Name	sugar ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7)	-0.97
Kyte-Doolittle Hydrophobicity Value	-0.088
Molecular Weight (kDa)	42.0
Isoelectric Point (pI)	6.67

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002429 (526 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PPS_1047 Search term: sugar ABC transporter ATP-binding protein

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000384881 ATP binding cassette subfamily B member 5 [Source:HGNC Symbol;Acc:HGNC:46] E-value: 2.3e-20 Percent Identity: 31.1

References