Pseudomonas putida S16, PPS_1402

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_1402
Name
Replicon chromosome
Genomic location 1542934 - 1545357 (+ strand)

Cross-References

RefSeq YP_004700857.1
GI 339486329
Entrez 10937060
INSDC AEJ11977.1
NCBI Locus Tag PPS_1402
UniParc UPI0002173804
UniProtKB Acc F8G3N8
UniProtKB ID F8G3N8_PSEP6
UniRef100 UniRef100_F8G3N8
UniRef50 UniRef50_D7I2P9
UniRef90 UniRef90_I7BXD2

Product

Feature Type CDS
Coding Frame 1
Product Name
GAF and PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Synonyms
Evidence for Translation
Charge (pH 7) -19.96
Kyte-Doolittle Hydrophobicity Value -0.069
Molecular Weight (kDa) 90043.9
Isoelectric Point (pI) 5.16

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 481 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000828 (485 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_1402

Human Homologs

References

No references are associated with this feature.