Pseudomonas putida S16, PPS_1954

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_1954
Name
Replicon chromosome
Genomic location 2185091 - 2185594 (- strand)

Cross-References

RefSeq YP_004701401.1
GI 339486873
Entrez 10937604
INSDC AEJ12521.1
NCBI Locus Tag PPS_1954
UniParc UPI000217381E
UniProtKB Acc F8FYT2
UniProtKB ID F8FYT2_PSEP6
UniRef100 UniRef100_F8FYT2
UniRef50 UniRef50_F8FYT2
UniRef90 UniRef90_F8FYT2

Product

Feature Type CDS
Coding Frame 1
Product Name
luciferase family protein
Synonyms
Evidence for Translation
Charge (pH 7) -0.05
Kyte-Doolittle Hydrophobicity Value -0.182
Molecular Weight (kDa) 18393.7
Isoelectric Point (pI) 6.98

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 115 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001144 (401 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_1954

Human Homologs

References

No references are associated with this feature.